We suggest you to install Anaconda in your home directory. Anaconda is a high performance distribution of Python and R and includes over 100 of the most popular Python, R and Scala packages for data science. 1. Install Anaconda 2.7 # module add gcc/4.8.5 Get the Anaconda 2.7 from https://www.continuum.io/downloads # chmod u+x [The downloaded […]
1. Create a directory “R_libs” in your home and then export to your BASH environment. # mkdir /home/[your_user_id]/R_libs # cd /home/[your_user_id]/R_libs # export R_LIBS=”/home/[your_user_id]/R_libs” 2. Include the R module of Jade # module add gcc/4.9.3 # module add bzip2/1.0.6/gcc/4.9.3 # module add pcre/8.39/gcc/4.9.3 # module add zlib/1.2.8/gcc/4.9.3 # module add xz/5.2.2/gcc/4.9.3 # module add libcurl/7.49.1/gcc/4.9.3 […]
Please use the following steps to install Perl and module in your home directory: 1. Check the currently verion of Perl # perl -v This is perl, v5.10.1 (*) built for x86_64-linux-thread-multi …… 2. Install Perlbrew # curl -L http://xrl.us/perlbrewinstall | bash # source ~/perl5/perlbrew/etc/bashrc 3. You may need to add the following red line in […]
ICTO encourages to contribute your resources to enlarge the capacity and performance of HPC Cluster. You can consider to purchase your own servers or GPU accelerators according to the specification defined by ICTO and then join HPC cluster. In addition, although ICTO will provide start-up storage space for each user, some users may require larger […]
The purpose of building the HPC Cluster is to provide good assistance to the increasing numbers of academic researches that require intensive computational resources. Interested academic staff can contact us for details and apply for an account on HPC Cluster. For research purpose, they can also apply accounts for their students and research fellows. For […]
HPCC runs under the control of a queue management system which is SLURM (Simple Linux Utility for Resource Management). SLURM is similar to most other queue systems. You write a batch script and submit it to the queue manager. The queue manager then schedules your job to run on the designated queue (called PARTITION in SLURM). Your job […]
In order to use the installed software, it is necessary to configure the relating environment variables for compilers and libraries so that searching paths are correct, corresponding libraries can be linked up, license servers can be connected, etc. To make it easily for you to select and switch between different software packages, ‘modules’ (modules.sourceforge.net) has […]
You may also refer to the output of the following command to get the most updated information. ‘module avail’ Please refer the table here a rough overview of the available software.