Singularity (https://sylabs.io/singularity/) enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don’t have to ask your cluster admin to install anything for you, you can put it in a Singularity container and run. Did you […]
Category: HPC Cluster
How to use Job Composer to clone a Job from a Selected Job on HPCC?
The Job Composer allows you to create and manage batch job submissions through a web interface. To create jobs through Open OnDemand dashboard (https://login2.coral.um.edu.mo/), navigate to Jobs > Job Composer from the dashboard. Creating a Job from Selected Job: To create a new job based on an existing one, select New Job > From Selected […]
How to use Job Composer to create a Job from a Specified Path on HPCC?
The Job Composer allows you to create and manage batch job submissions through a web interface. To create jobs through Open OnDemand dashboard (https://login2.coral.um.edu.mo/), navigate to Jobs > Job Composer from the dashboard. Creating a Job from Specified Path: When creating a job from a specified path, please ensure that your scripts are present in […]
How to use Job Composer to create a Job from a Template on HPCC?
The Job Composer allows you to create and manage batch job submissions through a web interface. To create jobs through Open OnDemand dashboard (https://login2.coral.um.edu.mo/), navigate to Jobs > Job Composer from the dashboard. Creating a Job from a Template: On the Job Composer page, you can create a job from different templates. Simply navigate to […]
How to use Interactive Software MATLAB on HPCC?
In the Open OnDemand dashboard (https://login2.coral.um.edu.mo/), you can launch an interactive Software MATLAB on a compute node within HPCC Coral using the noVNC client through a web browser. This allows you to have full access to the resources provided by these nodes. To launch a noVNC session, click on the MATLAB icon on the dashboard. […]
How to use Interactive Software Jupyter Notebooks on HPCC?
In the Open OnDemand dashboard (https://login2.coral.um.edu.mo/), you can launch an interactive Software Jupyter Notebooks on a compute node within HPCC Coral using the noVNC client through a web browser. This allows you to have full access to the resources provided by these nodes. To launch a noVNC session, click on the Jupyter Notebooks icon on […]
How to use Interactive Desktop on HPCC?
In the Open OnDemand dashboard (https://login2.coral.um.edu.mo/), you can launch an interactive desktop on a compute node within HPCC Coral using the noVNC client through a web browser. This allows you to have full access to the resources provided by these nodes. To launch a noVNC session, Select Interactive Desktop and then choose a PARTITION (e.g., […]
How to access the Web-Based SSH and GUI desktop on HPCC?
Web-based SSH In the Open OnDemand dashboard (https://login2.coral.um.edu.mo/), you can access the Web-Based SSH by selecting Clusters and then choosing login0 SSH or login2 SSH from the menu, or simply clicking on the icon on the dashboard. A terminal will launch through the web-browser. Web-based GUI To access the GUI desktop, please select Clusters and […]
How to check the Jobs Status on HPCC?
In the Open OnDemand dashboard (https://login2.coral.um.edu.mo/), you can access the Web-Based Active Jobs by selecting Jobs and then choosing Active Jobs from the menu, or simply clicking on the icon on the dashboard. It will display a list of your queued and running batch jobs on the cluster. You can easily Filter and Sort the […]
How to change password on HPCC?
To change your password on the HPCC Coral, click on the “Coral Change Password” icon located on the Open OnDemand dashboard (https://login2.coral.um.edu.mo/). A terminal will launch through the web-browser, type “passwd” in the terminal to change your password: A prompt asking for the current password will appear, enter your current password and press Enter. *Note: […]